代表性合作文章
目前,希望组一共发表高水平SCI论文近300篇,总影响因子3000+,包含Cell、Nature、Science、Nature Genetics、Molecular Plant等期刊。
发表年份 | 研究对象 | 发表期刊 | 影响因子 | 第一单位 | 标题 |
2023 | 人类 | Clinical and Translational Medicine | 10.6 | 北京大学第五临床医学学院 | Small Extrachromosomal Circular DNAs as Biomarkers for Multi-Cancer Diagnosis and Monitoring |
2023 | 人类 | nature biotechnology | 46.9 | 复旦大学生命科学学院 | Multi-omics data integration using ratio-based quantitative profiling with Quartet reference materials |
2023 | 菠菜 | New Phytologist | 9.4 | 河南师范大学生命科学学院 | A rapid method for assembly of single chromosome and identification of sex determination region based on single-chromosome sequencing |
2023 | 人类 | Clinical and Experimental Medicine | 4.6 | 首都儿科研究所血液科 | Somatic ARAF mutations in pediatric Langerhans cell histiocytosis:clinicopathologic, genetic and functional profling |
2023 | 野生大麦 | Scientific Data | 9.8 | 长江大学作物抗逆性技术研究中心 | High-quality wild barley genome assemblies and annotation with Nanopore long reads and Hi-C sequencing data |
2023 | 马齿苋 | Plant Physiology | 7.4 | 中国科学院植物研究所 | Gene duplications facilitate C4-CAM compatibility in common purslane |
2023 | 人类 | Genomics, Proteomics & Bioinformatics | 9.5 | 北京大学人民医院 | T2T-YAO: A Telomere-to-telomere Assembled Diploid Reference Genomefor Han Chinese |
2023 | 长豇豆 | Plant Biotechnology Journal | 13.8 | 广东省农业科学院蔬菜研究所叶菜豆类资源与育种团队 | A near-complete assembly of asparagus bean provides insights into anthocyanin accumulation in pods |
2023 | 兰花螳螂、枯叶螳螂 | Nature Communications | 16.6 | 中国科学院动物研究所 | Evolutionary genomics of camouflage innovation in the orchid mantis |
2023 | 水稻 | Molecular Plant | 27.5 | 基因组所 | A complete assembly of the rice Nipponbare reference genome |
2023 | 枣 | Plant Communications | 10.5 | 河北农业大学 | Insights into the evolution and spatial chromosome architecture of jujube from an updated gapless genome assembly |
2023 | 人基因组 | Cell Research | 44.1 | 浙江大学医学院附属第四医院国际医学研究所基因组研究室 | The complete and fully-phased diploid genome of a male Han Chinese |
2023 | 超蔷薇类 | Molecular Ecology Resources | 7.7 | 河南大学生命科学学院 | Phylogenomic and syntenic data demonstrate complex evolutionary processes in early radiation of the rosids |
2023 | 海南砂、阳春砂 | Plant Physiology | 7.4 | 广州中医药大学岭南中药资源教育部重点实验室 | Comparison of Fructus Amomi genomes reveals the genetic basis of volatile terpenoids divergence and bornyl diphosphate synthase evolution |
2023 | 人类肠道 | Advanced Science | 15.1 | 华中科技大学 | Long-Read Sequencing Reveals Extensive DNA Methylations in Human Gut Phagenome Contributed by Prevalently Phage-Encoded Methyltransferases |
2023 | 蛇 | Cell | 64.5 | 中国科学院成都生物研究所 | Large-scale snake genome analyses provide insights into vertebrate development |
2023 | 人泛基因组 | Nature | 64.8 | 复旦大学生命科学学院进化生物学中心 | A pangenome reference of 36 Chinese populations |
2023 | 灵长类 | Science | 56.9 | 昆明动物研究所 | Phylogenomic analyses provide insights intoprimate evolution |
2023 | 玉米 | Nature Genetics | 30.8 | 中国农业大学植物遗传育种系 | A complete telomere-to-telomere assembly of the maize genome |
2023 | 耳蜗突触病变 | Nature Communications | 16.6 | 上海交通大学医学院上海市第九人民医院耳鼻咽喉头颈外科 | Cochlear transcript diversity and its role in auditory functions implied by an otoferlin short isoform |
2023 | NextPolish2 | bioRxiv | 西安交大 | NextPolish2:a repeat-aware polishing tool for genomes assembled using HiFi long reads | |
2023 | 微萍 | PNAS | 12.779 | 北京大学和美国密西西比州立大学 | Plant-on-chip:core morphogenesis processes in the tiny plant Wolffia australiana |
2023 | NextDenovo | bioRxiv | 北京希望组 | An efficient error correction and accurate assembly tool for noisy long reads | |
2023 | 脊髓性肌萎缩 | Neuromuscular Disorders | 3.538 | 首都儿科研究所医学遗传学系 | Novel Alu-mediated deletions of the SMN1 gene were identified by ultra-long read sequencing technology in patients with spinal muscular atrophy |
2023 | 结直肠癌 | PLOS GENETICS | 6.02 | 华中科技大学同济医学院协和医院 | Long-read sequencing identifies novel structural variations in colorectal cancer |
2023 | 三维基因组 | Nature Communications | 17.694 | 中山大学中山眼科中心肖传乐团队 | High-throughput Pore-C reveals the single-allele topology and cell type-specificity of 3D genome folding |
2023 | 南极磷虾 | Cell | 66.85 | 中国水产科学研究院黄海水产研究所 | The enormous repetitive Antarctic krill genome reveals environmental adaptations and population insights |
2023 | 家鸡 | PNAS | 12.779 | 西南大学生命科学学院 | Evolutionary analysis of a complete chicken genome |
2023 | 杂草 | Nature Communications | 17.694 | 植物分子遗传学国家重点实验室 | Common evolutionary trajectory of short life-cycle in Brassicaceae ruderal weeds |
2023 | 樱花 | The Plant Journal | 7.091 | 北京林业大学园林学院 | Genome assembly, resequencing and genome-wide association analyses provide novel insights into the origin, evolution and flower colour variations of flowering cherry |
2023 | 鸡 | Nature Communications | 17.694 | 罗切斯特大学 | Amniotes co-opt intrinsic genetic instability to protect germ-line genome integrity |
2023 | 橡胶树 | Plant Biotechnology Journal | 13.263 | 中国热带农业科学院橡胶研究所 | Chromosome-level wild Hevea brasiliensis genome provides new tools for genomic-assisted breeding and valuable loci to elevate rubber yield |
2022 | 马铃薯块茎蛾 | Scientific Data | 8.501 | 中国农业科学院植物保护所植物病虫害生物学国家重点实验室 | Chromosomal-level genome assembly of potato tuberworm, Phthorimaea operculella: a pest of solanaceous crops |
2022 | 急淋白血病 | Cancers | 6.575 | 首都医科大学北京儿童医院 | Optical Genome Mapping for Comprehensive Assessment of Chromosomal Aberrations and Discovery of New Fusion Genes in Pediatric B-Acute Lymphoblastic Leukemia |
2022 | 寄生蜂 | Nature Communications | 17.694 | 浙江大学昆虫科学研究所 | Genomic signatures associated with maintenance of genome stability and venom turnover in two parasitoid wasps |
2022 | 马铃薯 | Molecular Plant | 21.949 | 山东省农业科学院蔬菜研究所 | The gap-free potato genome assembly reveals large tandem gene clusters of agronomical importance in highly repeated genomic regions |
2022 | 苦楝 | Plant Biotechnology Journal | 13.263 | 华南农业大学植物保护学院 | Meliaceae genomes provide insights into wood development and limonoids biosynthesis |
2022 | 四川金粟兰 | Nature Communications | 17.694 | 兰州大学刘建全团队 | The Chloranthus sessilifolius genome provides insight into early diversification of angiosperms |
2022 | 家蚕 | Nature Communications | 17.694 | 西南大学 | High-resolution silkworm pan-genome provides genetic insights into artificial selection and ecological adaptation |
2022 | 豌豆 | Nature Genetics | 41.307 | 中国农业科学院作物科学研究所 | Improved pea reference genome and pan-genome highlight genomic features and evolutionary characteristics |
2022 | 中华绒螯蟹 | Science Advances | 14.957 | 上海海洋大学水产养殖工程研究中心 | “Omics” data unveil early molecular response underlying limb regeneration in the Chinese mitten crab, Eriocheir sinensis |
2022 | 草果 | Horticulture Research | 7.291 | 华南农业大学自然资源与环境学院 | Chromosome-level genome assembly of Amomum tsao-ko provides insights into the biosynthesis of flavor compounds |
2022 | 拟南芥 | The Plant Journal | 7.091 | 中国农业科学院深圳农业基因组研究所 | Long-read sequencing characterizes mitochondrial and plastid genome variants in Arabidopsis msh1 mutants |
2022 | 阳春砂 | The Plant Journal | 7.091 | 广州中医药大学药学院 | Chromosome-level genome assembly and functional characterization of terpene synthases provide new insights into the volatile terpenoid biosynthesis of Wurfbainia villosa |
2022 | 红花槭 | Plant Physiology and Biochemistry | 5.437 | 安徽省农业科学院农业工程研究所 | The chromosome-scale genome provides insights into pigmentation in Acer rubrum |
2022 | 绵羊 | Genome Research | 9.438 | 中国农业大学动物科学技术学院 | Genomic analyses of Pamir argali, Tibetan sheep, and their hybrids provide insights into chromosome evolution, phenotypic variation, and germplasm innovation |
2022 | 蝴蝶 | Cell | 66.85 | 北京大学生命科学学院蛋白质与植物基因研究国家重点实验室 | The evolution and diversification of oakleaf butterflies |
2022 | 大麦 | Plant Biotechnology Journal | 13.263 | 长江大学 | Genome architecture and diverged selection shaping pattern of genomic differentiation in wild barley |
2022 | 鼠尾草 | Cell Reports | 9.995 | 上海植物研究所植物分子遗传学国家重点实验室 | The Sage Genome Provides Insight into the Evolutionary Dynamics of Diterpene Biosynthesis Gene Cluster in Plants |
2022 | 薯蓣 | Horticulture Research | 7.291 | 武汉大学生命科学学院杂交水稻国家重点实验室 | The genome of Dioscorea zingiberensis sheds light on the biosynthesis, origin and evolution of the medicinally important diosgenin saponins |
2022 | 水稻 | Cell Research | 46.297 | 中国农业科学院深圳农业基因组研究所 | A super pan-genomic landscape of rice |
2022 | 燕麦 | Nature Genetics | 41.307 | 四川农业大学西南地区作物基因探索与利用国家重点实验室 | Reference genome assemblies reveal the origin and evolution of allohexaploid oat |
2022 | 谷子 | Molecular Plant | 21.949 | 山西农业大学生命科学学院小作物种质创新与分子育种山西省重点实验室 | Multi-omics analyses of 398 foxtail millet accessions reveal genomic regions associated with domestication, metabolite traits and anti-inflammatory effects |
2022 | 闽楠 | Plant Communications | 8.625 | 浙江农林大学林业与生物技术学院亚热带造林国家重点实验室 | The chromosome-scale genome of Phoebe bournei reveals contrasting fates of terpene synthase (TPS)-a and TPS-b subfamilies |
2022 | 甘蔗 | Nature Genetics | 41.307 | 福建农林大学生命科学学院甘蔗国家工程研究中心 | Genomic insights into the recent chromosome reduction of autopolyploid sugarcane Saccharum spontaneum |
2022 | 西瓜 | Molecular Plant | 21.949 | 山东省潍坊市高级农业科学实验室 | A telomere-to-telomere gap-free reference genome of watermelon and its mutation library provide important resources for gene discovery and breeding |
2022 | 拟南芥 | Molecular Plant | 21.949 | 植物基因组学国家重点实验室和国家植物基因研究中心 | A near-complete assembly of an Arabidopsis thaliana genome |
2022 | 马铃薯 | Molecular Plant | 21.949 | 中国农业科学院深圳农业基因组研究所 | Genome architecture and tetrasomic inheritance of autotetraploid potato |
2022 | 广藿香 | Nature Communications | 17.694 | 广州中医药大学药学院药用植物生理生态研究所 | Chromosome-level and haplotype-resolved genome provides insight into the tetraploid hybrid origin of patchouli |
2022 | 水稻 | Plant Biotechnology Journal | 13.263 | 北京大学高级农业科学学院和生命科学学院 | The telomere-to-telomere gap-free genome of four rice parents reveals SV and PAV patterns in hybrid rice breeding |
2022 | 水稻 | Genome Research | 9.438 | 上海交通大学生命科学技术学院 | Long-read sequencing of 111 rice genomes reveals significantly larger pan-genomes |
2022 | 毒蘑菇 | PNAS | 12.779 | 昆明植物所 | Genes and evolutionary fates of the amanitin biosynthesis pathway in poisonous mushrooms |
2022 | 番木瓜 | Nature Genetics | 41.307 | 福建农林大学 | SunUp and Sunset genomes revealed impact of particle bombardment mediated transformation and domestication history in papaya |
2022 | 苏铁 | Nature Plants | 17.352 | 中国深圳华大基因农业基因组学国家重点实验室 | The Cycas genome and the early evolution of seed plants |
2022 | 飞蛙 | PNAS | 12.779 | 中国科学院成都生物研究所 | Genomic adaptations for arboreal locomotion in Asian flying treefrogs |
2022 | 落叶松 | JIPB|Journal of Integrative Plant Biology | 9.106 | 中国林业科学院树木遗传育种国家重点实验室 | The Larix kaempferi genome reveals new insights into wood properties |
2022 | 象腿蕉 | GigaScience | 7.658 | 广东省应用植物学重点实验室 | A chromosome-level reference genome of Ensete glaucum gives insight into diversity and chromosomal and repetitive sequence evolution in the Musaceae |
2022 | 康乃馨 | Plant Biotechnology Journal | 13.263 | 华中农业大学园艺与林业科学学院园艺植物生物学重点实验室 | Integrated multi-omic data and analyses reveal the pathways underlying key ornamental traits in carnation flowers |
2022 | 象草 | Molecular Ecology Resources | 8.678 | 生物材料与绿色造纸国家重点实验室 | Chromosome-scale genome assembly provides insights into speciation of allotetraploid and massive biomass accumulation of elephant grass (Pennisetum purpureum Schum.) |
2022 | 油茶 | The Plant Journal | 7.091 | 中南林业科技大学教育部非木材林木培育与保护重点实验室 | Chromosome-level genome of Camellia lanceoleosa provides a valuable resource for understanding genome evolution and self-incompatibility |
2021 | 猪 | Molecular Ecology Resources | 7.7 | 湖南农业大学 | Long-read assembly of the Chinese indigenous Ningxiang pig genome and identification of genetic variations in fat metabolismamong different breeds |
2021 | 椰子 | Genome Biology | 17.906 | 海南省崖州湾种子实验室、海南大学 | High-quality reference genome sequences of two coconut cultivars provide insights into evolution of monocot chromosomes and differentiation of fiber content and plant height |
2021 | 拟南芥 | GPB | 西安交通大学叶凯 | High-quality Arabidopsis thaliana Genome Assembly with Nanopore and HiFi Long Reads | |
2021 | 百岁兰 | Nature Communications | 17.694 | 中国科学院武汉植物园 | The Welwitschia genome reveals unique biology underpinning extreme longevity in deserts |
2021 | 波纹唇鱼 | Molecular Ecology Resources | 8.678 | 上海大学海洋动物分类学与进化重点实验室 | Chromosome-level genome assembly of the endangered humphead wrasse Cheilinus undulatus: Insight into the expansion of opsin genes in fishes |
2021 | 牦牛 | Molecular Biology and Evolution | 8.8 | 刘建全团队 | Structural Variants Selected during Yak Domestication Inferred from Long-Read Whole-Genome Sequencing |
2021 | SARS-CoV-2 | Virologica Sinica | 6.947 | 中国科学院生物安全大科学中心武汉病毒研究所 | Rapid Acquisition of High-Quality SARS-CoV-2 Genome via AmpliconOxford Nanopore Sequencing |
2021 | 小鼠和人类精子细胞 | Nature Communications | 12.121 | 美国罗切斯特大学李鑫团队与爱荷华大学(现俄亥俄州立大学)区健辉团队 | Single-molecule long-read sequencing reveals a conserved intact long RNA profile in sperm |
2021 | 两种真骨鱼(sailfish and swordfish) | Molecular Biology and Evolution | 11.062 | 国科学院深海科学与工程研究、西北工业大学 | The Genomes of Two Billfishes Provide Insights into the Evolution of Endothermy in Teleosts |
2021 | 蚯蚓 | Nature子刊Communications Biology | 7.396 | 中国农业大学资源与环境学院孙振钧教授课题组 | Amynthas corticis genome reveals molecular mechanisms behind global distribution |
2021 | 非洲肺鱼 | Cell | 38.637 | 西北工业大学生态与环境学院 | African lungfish genome sheds light on the vertebrate water-to-land transition |
2021 | 澳洲肺鱼 | Nature | 42.778 | 德国康斯坦茨大学生物系、德国维尔茨堡大学生物中心等 | Giant lungfish genomeelucidates the conquest of land by vertebrates |
2021 | 花椰菜 | BMC Biology | 7.364 | 北京农林科学院蔬菜国家工程研究中心 | Genome sequencing sheds light on the contribution of structural variants to Brassica oleracea diversification |
2021 | 毛榛 | Horticulture Research | 5.404 | 刘建全团队 | The Corylus mandshurica genome provides insights into the evolution of Betulaceae genomes and hazelnut breeding |
2021 | 百香果 | Horticulture Research | 5.404 | 中国热带农业科学院海口实验站 | Chromosome-scale genome assembly provides insights into the evolution and flavor synthesis of passion fruit (Passiflora edulis Sims |
2020 | 峨眉锥栗 | Nature Communications | 12.121 | 西双版纳植物园 | Genomic basis of homoploid hybrid speciation within chestnut trees |
2020 | LAMP新冠检测流程 | bioRxiv | – | 希望组 | Rapid detection of SARS-CoV-2 and other respiratory viruses by using LAMP method with Nanopore Flongle workflow |
2020 | 新冠患者单细胞 | Cell Discovery | 6.255 | 第二军医大学国家肝癌研究中心 | Immune cell profiling of COVID-19 patients in the recovery stage by single-cell sequencing |
2020 | 眼咽远端型肌病 | American Journal of Human Genetics | 10.502 | 北大第一医院神经内科 | Expansion of GGC Repeat in GIPC1 Is Associated with Oculopharyngodistal Myopathy |
2020 | 多鳞白甲鱼 | Molecular Ecology Resources | 6.286 | 西南大学生命科学学院 | Chromosome-level genome assembly of a cyprinid fish Onychostoma macrolepis by integration of Nanopore Sequencing, Bionano and Hi-C technology |
2020 | 红鲫 | Science Advances | 13.116 | 云南大学 | From asymmetrical to balanced genomicdiversification during rediploidization: subgenomic evolution in allotetraploidfish |
2020 | 蚯蚓 | Nature Communications | 12.121 | 中国科学院昆明动物研究所 | Genome and single-cell RNA-sequencing of the earthworm Eisenia andrei identifies cellular mechanisms underlying regeneration |
2020 | 镰刀菌菌株Fo47 | bioRxiv | – | 西安交通大学生命科学与技术学院 | Chromosome-scale genome assembly of Fusarium oxysporum strain Fo47, a fungal endophyte and biocontrol agent |
2020 | Stain R3-44T | International Journal of Systematic and Evolutionary Microbiology | #N/A | 武汉大学生命科学学院 | Chitinimonas arctica sp. nov., isolated from Arctic tundra soil |
2020 | 光果甘草 | Bioorganic & Medicinal Chemistry Letters | 2.572 | 北京中医药大学生命科学学院 | RNA-Seq based transcriptome analysis reveals the molecular mechanism of triterpenoid biosynthesis in Glycyrrhiza glabra |
2020 | 杨树 | bioRxiv | – | 四川大学生命科学学院 | A general model to explain repeated turnovers of sex determination in the Salicaceae |
2020 | 花生 | #N/A | 福建农林大学 | High‑density SNP map facilitates fne mapping of QTLs and candidate genes discovery for Aspergillus favus resistance in peanut (Arachis hypogaea) | |
2020 | 草棉、亚洲棉、陆地棉 | Nature Genetics | 27.603 | 武汉大学高等研究院 | Genome sequence of Gossypium herbaceum and genome updates of Gossypium arboreum and Gossypium hirsutum provide insights into cotton A-genome evolution |
2020 | 松江鲈鱼 | bioRxiv | – | 南通大学 | De novo assembly of trachidermus fasciatus genome by nanopore sequencing |
2020 | 炭疽菌 | Molecular Plant-Microbe Interactions | 3.696 | 西北农林科技大学 | Highly Contiguous Genome Resource of Colletotrichum fructicola Generated Using Long-Read Sequencing |
2020 | 马尾松毛虫 | Molecular Ecology Resources | 6.286 | 中国林业科学研究院森林生态环境与保护研究所 | Chromosome-level genome assembly of an important pine defoliator,Dendrolimus punctatus (Lepidoptera; Lasiocampidae) |
2020 | 油菜 | Plant Journal | 6.141 | 中国农业科学院油料作物研究所 | A global survey of the transcriptome of the allopolyploid Brassica napus based on single molecule long‐read isoform sequencing and Illumina‐based RNA‐seq data |
2020 | 望春玉兰 | PLoS one | 2.74 | 中国科学院深圳仙湖植物园 | The draft mitochondrial genome of Magnolia biondii and mitochondrial phylogenomics of angiosperms |
2020 | 先天性运动眼球震颤 | Human Genetics | 5.743 | 中山大学眼科中心 | Structural variations in a non‑coding region at 1q32.1 are responsible for the NYS7 locus in two large families |
2020 | strain MK6-18T | International Journal of Systematic and Evolutionary Microbiology | #N/A | 武汉大学生命科学学院 | Roseovarius arcticus sp. nov., a bacterium isolated from Arctic marine sediment |
2020 | 白粉虱 | Molecular Ecology Resources | 6.286 | 中国农业科学院蔬菜花卉研究所 | Chromosome‐level genome assembly of the greenhouse whitefly (Trialeurodes vaporariorum Westwood) |
2020 | 罗非鱼 | bioRxiv | – | 西南大学淡水鱼繁殖与发育重点实验室 | High-quality chromosome-level genomes of two tilapia species reveal their evolution of repeat sequences and sex chromosomes |
2020 | 黑尾近红鲌 | Molecular Ecology Resources | 6.286 | 九江学院药学与生命科学学院 | High‐quality genome assembly and transcriptome of Ancherythroculter nigrocauda, an endemic Chinese cyprinid species |
2020 | 大肠杆菌 | Antimicrobial Agents and Chemotherapy | 4.904 | 华南农业大学兽医学院动物源菌耐药性国家风险评估实验室 | Co-occurrence of plasmid-mediated tigecycline and carbapenem resistance in Acinetobacter spp. from waterfowls and their neighboring environment. |
2020 | 巨尾阿丽蝇 | GigaScience | 5.993 | 中南大学基础医学院 | Chromosome-level genome assembly of Aldrichina grahami, a forensically important blowfly. |
2020 | 油桐 | GENOMICS PROTEOMICS & BIOINFORMATICS | 7.051 | 中南林业科技大学非木质林木培育与保护重点实验室 | Tung Tree (Vernicia fordii) Genome Provides A Resource for Understanding Genome Evolution and Improved Oil Production |
2020 | 沉香木 | GigaScience | 5.993 | 热带生物科学与生物技术研究所海南沉香工程研究中心 | Genome sequence of the agarwood tree Aquilaria sinensis (Lour.) Spreng: the first chromosome-level draft genome in the Thymelaeceae family |
2020 | 文竹 | Horticulture Research | 5.404 | 河南师范大学生命科学学院 | Chromosome-level genome assembly, annotation and evolutionary analysis of the ornamental plant Asparagus setaceus |
2020 | 芡实和金鱼藻 | Nature Plants | 13.256 | 四川大学的杨勇志、华北理工大学 | Prickly waterlily and rigid hornwort genomes shed light on early angiosperm evolution |
2020 | 角苔 | Nature Plants | 13.256 | 中国科学院植物研究所、福建农林大学、深圳仙湖植物园 | The hornwort genome and early land plant evolution |
2020 | NECAT | bioRxiv | – | 中山大学中山眼科中心 | Fast and accurate assembly of Nanopore reads via progressive error correction and adaptive read selection |
2020 | Stain AQ6-296T | International Journal of Systematic and Evolutionary Microbiology | #N/A | 武汉大学生命科学学院 | Pseudolysobacter antarcticus gen. nov., sp. nov., isolated from soil in Fildes Peninsula, Antarctica |
2020 | 人肠道乳酸链球菌 | Frontiers in Genetics | 3.258 | 南方医科大学 | Complete Genome Insights into Lactococcus petauri CF11 Isolated from a Healthy Human Gut Using Second- and Third-Generation Sequencing |
2020 | 水稻基因组比较 | bioRxiv | – | 武汉未来组 | Comparison of the two up-to-date sequencing technologies for genome assembly: HiFi reads of Pacbio Sequel II system and ultralong reads of Oxford Nanopore |
2020 | 基因分型 | Journal of Thrombosis and Thrombolysis | 2.054 | 华中科技大学同济医学院 | Rapid genotyping of F8 intron 22 inversion by nested PCR based on long‑distance PCR |
2020 | 染色体平衡易位 | Frontiers in Genetics | 3.258 | 中南大学基础医学院生殖与干细胞工程研究所 | Location of Balanced Chromosome-Translocation Breakpoints by Long-Read Sequencing on the Oxford Nanopore Platform |
2020 | 非洲猪瘟病毒 | Virologica Sinica | 3.242 | 中国科学院武汉病毒学研究所 | Potential m6A and m5C Methylations within the Genome of A Chinese African Swine Fever Virus Strain |
2020 | 中华绒螯蟹 | Frontiers in Genetics | 3.258 | 江苏省盐碱地生物资源重点实验室 | High-Quality Genome Assembly of Eriocheir japonica sinensis Reveals Its Unique Genome Evolution |
2020 | 多耐药铜绿假单胞菌 | Scientific Reports | 3.998 | 哥斯达黎加大学 | High quality 3C de novo assembly and annotation of a multidrug resistant ST-111 Pseudomonas aeruginosa genome: Benchmark of hybrid and non-hybrid assemblers |
2020 | 三疣梭子蟹 | GigaScience | 5.993 | 江苏省盐碱地生物资源重点实验室 | Chromosome-level genome assembly reveals the unique genome evolution of the swimming crab (Portunus trituberculatus) |
2020 | 菲牛蛭 | Frontiers in Genetics | 3.258 | 陕西师范大学 | Draft Genome of the Asian Buffalo Leech Hirudinaria manillensis. |
2020 | 圆点斑芫菁 | Frontiers in Genetics | 3.258 | 陕西师范大学 | Draft Genome of a Blister Beetle Mylabris aulica. |
2020 | strain W43T | FEMS Microbiology Letters | 1.987 | 上海海洋大学 | Polyphasic taxonomic analysis of Parasedimentitalea marina gen. nov., sp. nov., a psychrotolerant bacterium isolated from deep sea water of the New Britain Trench |
2020 | 象草 | Molecular Ecology Resources | 6.286 | 齐鲁理工大学生物工程学院 | Chromosome-Scale Genome Assembly Provides Insights into Speciation of Allotetraploid and Massive Biomass Accumulation of Elephant Grass (Pennisetum purpureum Schum.) |
2020 | 胡桃 | GigaScience | 5.993 | 中南林业科技大学 | Chromosomal-level assembly of Juglans sigillata genome using Nanopore, BioNano, and Hi-C analysis |
2020 | 草棉、亚洲棉、陆地棉 | Nature Genetics | 25.455 | 武汉大学高等研究院 | Genome sequence of Gossypium herbaceum and genome updates of Gossypium arboreum and Gossypium hirsutum provide insights into cotton A-genome evolution |
2020 | 单细胞技术 | Plos Biology | 7.076 | 汤富酬课题组 | Single-cell RNA-seq analysis of mouse preimplantation embryos by third-generation sequencing |
2020 | 白粉虱 | Molecular Ecology Resources | 7.049 | 中国农业科学院蔬菜花卉研究所蔬菜虫害防控创新团队和美国康奈尔大学BTI | Chromosome-level genome assembly of the greenhousewhitefly (Trialeurodes vaporariorum Westwood) |
2020 | Streptomyces lividans | Nature Microbiology | 14.3 | 武汉大学药学院 | SspABCD–SspE is a phosphorothioation-sensing bacterial defence system with broad anti-phage activities |
2020 | 马尾松毛虫 | Molecular Ecology Resources | 7.049 | 中国林业科学研究院森林生态环境与保护研究所 | Chromosome-level genome assembly of an important pine defoliator, Dendrolimus punctatus (Lepidoptera; Lasiocampidae) |
2020 | 白粉虱 | Molecular Ecology Resources | 7.049 | 中国农业科学院蔬菜花卉研究所 | Chromosome‐level genome assembly of the greenhouse whitefly (Trialeurodes vaporariorum Westwood) |
2020 | 黑尾近红鲌 | Molecular Ecology Resources | 7.049 | 九江学院 | High‐quality genome assembly and transcriptome of Ancherythroculter nigrocauda, an endemic Chinese cyprinid species |
2020 | 大肠杆菌 | Antimicrobial Agents and Chemotherapy | 4.715 | 华南农业大学 | Co-occurrence of plasmid-mediated tigecycline and carbapenem resistance in Acinetobacter spp. from waterfowls and their neighboring environment. |
2020 | 巨尾阿丽蝇 | GigaScience | 4.688 | 中南大学基础医学院 | Chromosome-level genome assembly of Aldrichina grahami, a forensically important blowfly. |
2020 | 硫杆菌-YNTRS-40 | Microorganisms | 4.167 | 黑龙江八一农业大学 | Complete Genome Sequence of Acidithiobacillus ferrooxidans YNTRS-40, a Strain of the Ferrous Iron- and Sulfur-Oxidizing Acidophile |
2020 | 多耐药铜绿假单胞菌 | Scientific Reports | 4.122 | 哥斯达黎加大学 | High quality 3C de novo assembly and annotation of a multidrug resistant ST-111 Pseudomonas aeruginosa genome: Benchmark of hybrid and non-hybrid assemblers |
2020 | 阿尔波特综合征 | Kidney Diseases | 3.111 | 南京大学医学院 | A Novel COL4A5 Splicing Mutation Causes Skipping of Exon 14 in a Chinese Family with Alport Syndrome |
2020 | 遗传性肾病 | Scientific Reports | 3.998 | 北京安贞医院 | SMRt sequencing revealed to be an effective method for ADTKDMUC1 diagnosis through follow-up analysis of a Chinese family |
2020 | JXY1 | Nature Microbiology | 15.54 | 武汉大学药学院 | SspABCD–SspE is a phosphorothioation-sensing bacterial defence system with broad anti-phage activities |
2020 | 链霉菌-N1-32 | Fish & Shellfish Immunology | – | 湖南师范大学生命科学学院 | Isolating a new Streptomyces amritsarensis N1-32 against fish pathogens and determining its effects on disease resistance of grass carp |
2020 | 硫杆菌-YNTRS-40 | Microorganisms | 4.152 | 黑龙江八一农业大学生命科学与生物技术学院 | Complete Genome Sequence of Acidithiobacillus ferrooxidans YNTRS-40, a Strain of the Ferrous Iron- and Sulfur-Oxidizing Acidophile |
2020 | SCAWS-G2T | International Journal of Systematic and Evolutionary Microbiology | #N/A | 中国科学院微生物研究所 | Ktedonosporobacter rubrisoli gen. nov., sp. nov., a novel representative of the class Ktedonobacteria, isolated from red soil, and proposal of Ktedonosporobacteraceae fam. nov. |
2020 | strain SNB6 | Journal of Hazardous Materials | 9.038 | 四川大学自然科学学院 | Insight into the mechanisms of plant growth promoting strain SNB6 on enhancing the phytoextraction in cadmium contaminated soil |
2020 | 放线菌 | Extremophiles | 2.462 | 华南师范大学 | Comparative genomics analysis of Nitriliruptoria reveals the genomic differences and salt adaptation strategies |
2020 | 胡桃 | GigaScience | 4.688 | 中南林业科技大学 | Chromosomal-level assembly of Juglans sigillata genome using Nanopore, BioNano, and Hi-C analysis |
2020 | 沉香木 | GigaScience | 4.688 | 中国热带农业科学院热带生物技术研究所 | Genome sequence of the agarwood tree Aquilaria sinensis (Lour.) Spreng: the first chromosome-level draft genome in the Thymelaeceae family |
2020 | 杉木 | Scientific Reports | 3.998 | 浙江农林大学林业与生物技术学院生物技术研究所 | Genome survey of Chinese fir (Cunninghamia lanceolata): Identification of genomic SSRs and demonstration of their utility in genetic diversity analysis |
2020 | 水稻 | Plant Cell Reports | 3.825 | 安徽农业大学生命科学学院 | Maize WRKY114 gene negatively regulates salt‑stress tolerance in transgenic rice |
2020 | 莲 | BMC Genomics | 3.594 | 武汉大学生命科学学院 | Comparative population genomics reveals genetic divergence and selection in lotus, Nelumbo nucifera |
2020 | 水稻 | BMC Plant Biology | 3.497 | 武汉大学生命科学学院 | Wide crossing diversify mitogenomes of rice |
2020 | 樱桃 | BMC Plant Biology | 3.497 | 贵州大学农业生物工程研究所 | Comparative transcriptome analysis reveals the molecular regulation underlying the adaptive mechanism of cherry (Cerasus pseudocerasus Lindl.) to shelter covering |
2020 | 甘草 | Plant Growth Regulation | 2.388 | 北京中医药大学生命科学学院 | Identification of biosynthetic pathways involved in flavonoid production in licorice by RNA-seq based transcriptome analysis |
2020 | 桂花 | Forests | 2.221 | 南京林业大学风景园林学院 | Genome-Wide Identification of the Auxin Response Factor (ARF) Gene Family and Their Expression Analysis during Flower Development of Osmanthus fragrans |
2019 | 大肠杆菌 | Journal of Antimicrobial Chemotherapy | 5.439 | 华南农业大学兽医学院动物源菌耐药性国家风险评估实验室 | Detection of chromosome-mediated tet(X4)-carrying Aeromonas caviae in a sewage sample from a chicken farm. |
2019 | 寄生蜂 | Archives of Insect Biochemistry and Physiology | 1.536 | 浙江大学昆虫科学研究所 | Genome-wide characterization and transcriptomic analyses of neuropeptides and their receptors in an endoparasitoid wasp, Pteromalus puparum |
2019 | 鲤鱼-金鱼 | Genes | 3.759 | 华中农业大学水产学院 | Genetic Characteristic and RNA-Seq Analysis in Transparent Mutant of Carp–Goldfish Nucleocytoplasmic Hybrid |
2019 | 恒河猴 | Nature Communications | 12.121 | 中国科学院昆明动物所 | Long-read assembly of the Chinese rhesus macaque genome and identification of ape-specific structural variants |
2019 | 黄芩 | International Journal of Molecular Sciences | 4.556 | 青岛农业大学生命科学学院与中国医学科学院药用植物研究所 | Hybrid Sequencing of Full-Length cDNA Transcripts of the Medicinal Plant Scutellaria baicalensis |
2019 | 钩吻(断肠草) | Acta Pharmaceutica Sinica B | 7.097 | 湖南农业大学动物医学院,湖南省兽药工程技术研究中心 | Whole-genome sequencing and analysis of the Chinese herbal plant Gelsemium elegans |
2019 | 大肠杆菌 | Emerging Microbes & Infections | 5.776 | 华南农业大学兽医学院动物源菌耐药性国家风险评估实验室 | Emergence of mobile tigecycline resistance mechanism in Escherichia coli strains from migratory birds in China. |
2019 | 牡丹 | BMC Genomics | 3.594 | 北京市观赏植物重点实验室 | Comparative transcriptome and coexpression network analysis of carpel quantitative variation in Paeonia rockii |
2019 | 赤点石斑鱼 | Molecular Ecology Resources | 6.286 | 福建省水产科学研究院 | De Novo Assembly of a Chromosome-Level Reference Genome of Red Spotted Grouper (Epinephelus akaara) Using Nanopore Sequencing and Hi-C |
2019 | 戊糖片球菌 | Frontiers in Microbiology | 4.235 | 湖南师范大学生命科学学院 | A New Isolate of Pediococcus pentosaceus (SL001) with Antibacterial Activity Against Fish Pathogens and Potency in Facilitating the Immunity and Growth |
2019 | DeepMod | Nature Communications | 12.121 | 费城儿童医院、中山大学中山眼科中心 | Detection of DNA base modifications by deep recurrent neural network on Oxford Nanopore sequencing data |
2019 | 大肠杆菌 | Nature Microbiology | 15.54 | 华南农业大学兽医学院 | Plasmid-encoded tet(X) genes that confer high-level tigecycline resistance in Escherichia coli |
2019 | 酵母 | Genome Research | 11.093 | 美国俄亥俄州立大学 | Single-molecule long-read sequencing reveals the chromatin basis of gene expression |
2019 | 花生 | Nature genetics | 27.603 | 福建农林大学 | The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication |
2019 | 豆瓣菜 | Gene | 2.984 | 南京农业大学 | The complete chloroplast genome sequence of watercress (Nasturtium officinale R. Br.): Genome organization, adaptive evolution and phylogenetic relationships in Cardamineae |
2019 | 毛白杨 | Mitochondrial DNA Part B-Resources | 0.885 | The complete chloroplast genome of Populus tomentosa narrow crown, native to Northern China | |
2019 | 苹果 | Nature Communications | 12.121 | 中国农业科学院果树研究所 | A high-quality apple genome assembly reveals the association of a retrotransposon and red fruit colour |
2019 | 凡纳滨对虾 | Fish & Shellfish Immunology | – | 广东省动物保护与资源利用重点实验室 | Full-length transcriptome analysis of Litopenaeus vannamei reveals transcript variants involved in the innate immune system |
2019 | 蝗虫 | RNA Biology | 5.35 | 中国科学院北京生命科学研究院、动物研究所及中国科学院大学 | Long-read direct RNA sequencing by 5’-Cap capturing reveals the impact of Piwi on the widespread exonization of transposable elements in locusts |
2019 | 狮子鱼 | Nature ecology & evolution | 12.541 | 中科院深海科学与工程研究所,水生生物研究所以及西北工业大学生态与环境保护研究中心 | Morphology and genome of a snailfish from the Mariana Trench provide insights into deep-sea adaptation |
2019 | 中华绒螯蟹肠道微生物 | Microbiologyopen | 3.142 | 南京农业大学无锡渔业学院 | Change in the intestinal bacterial community structure associated with environmental microorganisms during the growth of Eriocheir sinensis. |
2019 | 橡胶 | Frontiers in Genetics | 3.258 | 农业部橡胶树生物学与遗传资源重点实验室 | Genome-Wide Identification and Characterization of the JAZ Gene Family in Rubber Tree (Hevea brasiliensis) |
2019 | 西瓜 | Nature Genetics | 27.603 | 北京市农林科学院、中国农科院郑州果树所 | Resequencing of 414 cultivated and wild watermelon accessions identifies selection for fruit quality traits |
2019 | NextPolish | Bioinformatics | 5.61 | 未来组 | NextPolish: a fast and efficient genome polishing tool for long read assembly. |
2019 | 非洲猪瘟病毒 | Science China-Life Sciences | 4.611 | 中国科学院武汉病毒研究所 | Nanopore sequencing of African swine fever virus |
2019 | 碧凤蝶 | GigaScience | 5.993 | 中国科学院昆明动物研究所 | Chromosomal-level reference genome of Chinese peacock butterfly (Papilio bianor)based |
2019 | 棉花 | Nature Communications | 12.121 | 武汉大学生命科学学院 | Multi-strategic RNA-seq analysis reveals a high-resolution transcriptional landscape in cotton |
2019 | 糜子 | Nature Communications | 12.121 | 中国农业大学 | Chromosome conformation capture resolved near complete genome assembly of broomcorn millet |
2019 | 高原鳅 | Frontiers in Genetics | 3.258 | 中国科学院水生生物研究所 | A Chromosome-Scale Reference Assembly of a Tibetan Loach, Triplophysa siluroides. |
2019 | 寄生蜂 | Archives of Insect Biochemistry and Physiology | 1.536 | 浙江大学昆虫科学研究所 | Biogenic amine biosynthetic and transduction genes in the endoparasitoid wasp Pteromalus puparum (Hymenoptera: Pteromalidae). |
2019 | 沙柳 | Mitochondrial DNA Part B-Resources | 0.885 | 南京林业大学 | The complete chloroplast genome and phylogenetic analysis of Salix triandra from China |
2019 | 槿麻 | bioRxiv | – | 广西大学农学院 | Comparative analysis of mitochondrial genome between UG93A and UG93B reveal common feature of 5’-end heterogeneity in mitochondrial genes of kenaf |
2019 | 玉米 | bioRxiv | – | 华中农业大学 | qKW9 encodes a pentatricopeptide repeat protein affecting photosynthesis and grain filling in maize |
2019 | FSHD | Journal of Medical Genetics | 4.943 | 中国医学科学院北京协和医院神经内科 | Single-molecule optical mapping enables accurate molecular diagnosis of facioscapulohumeral muscular dystrophy (FSHD) |
2019 | 空卵泡综合征 | Human Reproduction | 5.733 | 湖南师范大学医学院基础医学部 | ZP1 mutations are associated with empty follicle syndrome: evidence for the existence of an intact oocyte and a zona pellucida in follicles up to the early antral stage. A case report |
2019 | 神经核内包涵体疾病 | Journal of Medical Genetics | 4.943 | 北京大学第一医院神经内科 | Long-read sequencing identified repeat expansions in the 5′UTR of the NOTCH2NLC gene from Chinese patients with neuronal intranuclear inclusion disease |
2019 | 特发性震颤 | Brain | 11.337 | 中南大学湘雅医院 | Expansion of GGC repeat in human-specific NOTCH2NLC gene is associated with Essential Tremor |
2019 | 结构变异 | Journal of Medical Genetics | 4.943 | 复旦大学附属妇产科医院 | Long-read sequencing and haplotype linkage analysis enabled preimplantation genetic testing for patients carrying pathogenic inversions |
2019 | 神经核内包涵体疾病 | American Journal of Human Genetics | 10.502 | 中南大学湘雅医院老年医学科 | Expansion of Human-Specific GGC Repeat in Neuronal Intranuclear Inclusion Disease-Related Disorders |
2019 | 大肠杆菌 | Infection and Immunity | 3.201 | 中国农业科学院哈尔滨兽医研究所 | Identification of Host Adaptation Genes in Extraintestinal Pathogenic Escherichia coli during Infection in Different Hosts |
2019 | TRPV1离子通道 | Nature Communications | 12.121 | 昆明动物研究所 | Molecular basis for heat desensitization of TRPV1 ion channels |
2019 | 褐边绿刺蛾 | Toxins | 3.531 | 青岛大学药学院 | The Latoia consocia Caterpillar Induces Pain by Targeting Nociceptive Ion Channel TRPV1 |
2019 | 蜜蜂肠道微生物 | International Journal of Systematic and Evolutionary Microbiology | #N/A | 中国农业大学食品科学与营养工程学院 | Entomomonas moraniae gen. nov., sp. nov., a member of the family Pseudomonadaceae isolated from Asian honey bee gut, possesses a highly reduced genome |
2019 | DeepSignal | Bioinformatics | 5.61 | 中南大学 | DeepSignal: detecting DNA methylation state from Nanopore sequencing reads using deep-learning |
2019 | 蚯蚓 | bioRxiv | – | 中国农业大学 | Molecular mechanisms behind global distribution of earthworm revealed by the genome |
2019 | 环柄菇 | BMC Genomics | 3.594 | 中国科学院昆明植物研究所 | Genome of lethal Lepiota venenata and insights into the evolution of toxin-biosynthetic genes |
2019 | 乌鳢肠道微生物 | Aquaculture Nutrition | 2.231 | 浙江大学动物科学学院 | Effects of multienzyme complex and probiotic supplementation on the growth performance, digestive enzyme activity and gut microorganisms composition of snakehead (Channa argus) |
2019 | 寄生蜂 | International Journal of Biological Macromolecules | 5.162 | 浙江大学昆虫科学研究所 | Mitochondrial DNA and their nuclear copies in the parasitic wasp Pteromalus puparum: A comparative analysis in Chalcidoidea |
2019 | 内生真菌 | BMC Genomics | 3.594 | 中国热带农业科学院环境与植物保护研究所 | Genomic characteristics and comparative genomics analysis of the endophytic fungus Sarocladium brachiariae |
2019 | Strain YZ-8T | International Journal of Systematic and Evolutionary Microbiology | #N/A | 武汉大学生命科学学院 | Sphingomonas paeninsulae sp. nov., isolated from soil sampled at Fildes Peninsula, Antarctica Free |
2019 | 嗜热细菌 | Antonie van Leeuwenhoek | – | 中山大学 | Thermus caldilimi sp. nov., a thermophilic bacterium isolated from a geothermal area |
2019 | Crassaminicella | Marine Genomics | 1.672 | 中国科学院深海科学与工程研究所 | Genome analysis of Crassaminicella sp. SY095, an anaerobic mesophilic marine bacterium isolated from a deep-sea hydrothermal vent on the Southwest Indian Ridge |
2019 | Deinococcus psychrotolerans sp. nov. | International Journal of Systematic and Evolutionary Microbiology | #N/A | 武汉大学生命科学学院 | Deinococcus psychrotolerans sp. nov., isolated from soil on the South Shetland Islands, Antarctica |
2019 | 大肠杆菌 | Microorganisms | 4.152 | 华中农业大学 | Characteristics of a Colistin-Resistant Escherichia coli ST695 Harboring the Chromosomally-Encoded mcr-1 Gene |
2019 | Akkermansia muciniphila Strains | Frontiers in Cellular and Infection Microbiology | 4.123 | 上海交通大学生命科学与生物技术学院 | Strain-Specific Anti-inflammatory Properties of Two Akkermansia muciniphila Strains on Chronic Colitis in Mice |
2019 | 牡蛎 | Frontiers in Genetics | 3.258 | 鲁东大学农学院 | Nanopore Sequencing and De Novo Assembly of a Black-Shelled Pacific Oyster (Crassostrea gigas) Genome |
2019 | 昆虫线粒体 | Molecular Biology and Evolution | 11.062 | 浙江大学昆虫科学研究所 | Evolutionary Rate Correlation between Mitochondrial-Encoded and Mitochondria-Associated Nuclear-Encoded Proteins in Insects |
2019 | 紫斑牡丹 | BMC Genomics | 3.594 | 北京林业大学园林学院 | Comparative transcriptome and coexpression network analysis of carpel quantitative variation in Paeonia rockii |
2019 | 毛白杨 | PLoS one | 2.74 | 西南林业大学 | Comparative analysis of the complete chloroplast genomes of seven Populus species: Insights into alternative female parents of Populus tomentosa |
2019 | 猕猴桃 | ROYAL SOCIETY OPEN SCIENCE | 2.647 | 西南林业大学 | Induction, identification and genetics analysis of tetraploid Actinidia chinensis |
2019 | 蝴蝶兰 | Horticultural Plant Journal | 1.524 | 福建农林大学生命科学学院 | Transcriptomic Analysis of Differentially Expressed Genes and Alternative Splicing Events Associated with Crassulacean Acid Metabolism in Orchids |
2018 | 玉米 | Nature Genetics | 27.603 | 中国农业大学植物遗传育种系农业生物技术国家重点实验室和国家玉米改良中心 | Extensive intraspecific gene order and gene structural variations between Mo17 and other maize genomes |
2018 | 人 | Molecular Cell | 15.584 | 广州医科大学附属第三医院生物医学研究中心;中山大学中山眼科中心眼科国家重点实验室 | N6-Methyladenine DNA Modification in the Human Genome |
2018 | 拟南芥 | Developmental Cell | 10.092 | 新加坡国立大学和中国农业科学院生物技术研究所 | DNA N6-Adenine Methylationin Arabidopsis thaliana |
2018 | 微囊藻 | Harmful Algae | 3.707 | 中国科学院水生生物研究所淡水生态与生物技术国家重点实验室 | The highly heterogeneous methylated genomes and diverse restriction-modification systems of bloom-forming Microcystis |
2018 | 桂花 | Horticulture Research | 5.404 | 南京林业大学 | The chromosome-level quality genome provides insights into the evolution of the biosynthesis genes for aroma compounds of Osmanthus fragrans |
2018 | 菊花脑 | Molecular Plant | 12.084 | 中国医学科学院中药研究所中药鉴定与安全性评价重点实验室 | The Chrysanthemum nankingense genome provides insights into the evolution and diversification of chrysanthemum flowers and medicinal traits |
2018 | 青稞 | bioRxiv | – | 西藏农牧科学院 | Improved high-quality genome assembly and annotation of Tibetan hulless barley |
2018 | 小麦(不用于宣传) | Nature | 42.778 | 中国科学院遗传与发育生物学研究所植物细胞与染色体国家重点实验室的小麦基因组研究团队与遗传发育所的梁承志课题组等合作 | Genome sequence of the progenitor of wheat A subgenome Triticum urartu |
2018 | 玉米 | Nature Communications | 12.121 | 中国科学院遗传与发育生物学研究所 | A PECTIN METHYLESTERASE gene at the maize Ga1 locus confers male function in unilateral cross-incompatibility |
2018 | 水稻 | PLANT CELL AND ENVIRONMENT | 6.362 | 武汉大学杂交水稻国家重点实验室 | OsPRR37 confers an expanded regulation of the diurnal rhythms of the transcriptome and photoperiodic flowering pathways in rice |
2018 | 木棉 | GigaScience | 5.993 | 云南曲靖师范学院、西南林业大学 | De novo genome assembly of the red silk cotton tree (Bombax ceiba) |
2018 | 槿麻 | Scientific Reports | 3.998 | 广西大学农业学院 | Complete sequence of kenaf (Hibiscus cannabinus) mitochondrial genome and comparative analysis with the mitochondrial genomes of other plants |
2018 | 结构变异 | Hereditas | 2.412 | 中南大学生殖与干细胞工程研究所 | Long-read sequencing identified a causal structural variant in an exome-negative case and enabled preimplantation genetic diagnosis |
2018 | 癫痫 | Journal of Medical Genetics | 4.943 | 中南大学湘雅医院、美国费城儿童医院 | Long-read sequencing identified intronic repeat expansions in SAMD12 from Chinese pedigrees affected with familial cortical myoclonic tremor with epilepsy |
2018 | 肾病 | Experimental and Therapeutic Medicine | 1.785 | 吉林大学第一医院 | Recurrent primary hyperoxaluria type 2 leads to early post‑transplant renal function loss: A case report |
2018 | 纤毛虫 | BMC Genomics | 3.594 | 中国科学院水生生物研究所 | Pseudocohnilembus persalinus genome database – the first genome database of facultative scuticociliatosis pathogens |
2018 | 狗牙根 | Plant Physiology and Biochemistry | 3.72 | 扬州大学动物科学与技术学院 | Full-length RNA sequencing reveals unique transcriptome composition in bermudagrass |
2018 | 酵母 | Frontiers in Microbiology | 4.235 | 西南林业大学 | Functional Analysis of the FZF1 Genes of Saccharomyces uvarum |
2018 | Conidiobolus heterosporus | Applied Microbiology and Biotechnology | 3.53 | 安徽农业大学 | Mitochondrial genome of the entomophthoroid fungus Conidiobolus heterosporus provides insights into evolution of basal fungi |
2018 | 葡萄球菌 | Journal of Biotechnology | 3.503 | 浙江万里大学生物与环境科学学院 | Complete genome sequence of the highly Mn(II) tolerant Staphylococcus sp.AntiMn-1 isolated from deep-sea sediment in the Clarion-Clipperton Zone |
2018 | 鼠乳杆菌 | Microbiome | 11.607 | 上海交通大学生命科学与生物技术学院 | Predominant gut Lactobacillus murinus strain mediates anti-inflammaging effects in calorie-restricted mice |
2018 | 石蛾 | GigaScience | 5.993 | 中国农业大学植物保护学院 | The genome of an underwater architect, the caddisfly Stenopsyche tienmushanensis Hwang (Insecta: Trichoptera) |
2018 | 枯草芽孢杆菌 | Genome Announcements | – | 哈尔滨工业大学食品工程学院 | Complete Genome Sequence of the Poly–GlutamateSynthesizing Bacterium Bacillus subtilis Bs-115 |
2018 | 月季 | BMC Plant Biology | 3.497 | 中国农业大学 | Genomic and transcriptomic sequencing of Rosa hybrida provides microsatellite markers for breeding, flower trait improvement and taxonomy studies |
2018 | 嗜盐细菌 | Extremophiles | 2.462 | 中国科学院微生物研究所 | Isolation and complete genome sequence of Halorientalis hydrocarbonoclasticus sp. nov., a hydrocarbon‑degrading haloarchaeon |
2018 | 木棉 | Mitochondrial DNA Part B-Resources | 0.885 | 曲靖师范大学 | Complete chloroplast genome sequence of the red silk cotton tree (Bombax ceiba) |
2017 | 冬虫夏草线粒体 | Frontiers in microbiology | 4.235 | 湖南农业大学 | SMRT sequencing revealed mitogenome characteristics and mitogenome-wide DNA modification pattern in Ophiocordyceps sinensis |
2017 | 鹅掌楸 | PeerJ Preprints | – | 武汉植物园 | De novo assembly of expressed transcripts and analysis of pistil to identify genes involved in early stage of pollination in Liriodendron chinense |
2017 | 水稻(不用于宣传) | Nature communications | 12.121 | 中科院遗传所 | Sequencing and de novo assembly of a near complete indica rice genome |
2017 | 杜仲 | Molecular Plant | 12.084 | 中国林业科学研究院经济林研究开发中心 | The hardy rubber tree genome provides insights into the evolution of polyisoprene biosynthesis |
2017 | 棉花 | New Phytologist | 8.512 | 华中农业大学 | A global survey of alternative splicing in allopolyploid cotton: landscape, complexity and regulation |
2017 | 荷 | Plant Journal | 6.141 | 武汉植物园,武汉大学 | The evolution of plant microRNAs: insights from a basal eudicot sacred lotus |
2017 | 水稻 | Scientific Reports | 3.998 | 武汉大学 | Pedigree-based genome re-sequencing reveals genetic variation patterns of elite backbone varieties during modern rice improvement |
2017 | 油桐叶绿体 | Scientific Reports | 3.998 | 中南林业科技大学 | The complete chloroplast genome sequence of tung tree (Vernicia fordii): Organization and phylogenetic relationships with other angiosperms |
2017 | 矮牵牛(不用于宣传) | Scientific Reports | 3.998 | 华中农业大学 | Hybrid sequencing and map finding (HySeMaFi): optional strategies for extensively deciphering gene splicing and expression in organisms without reference genome |
2017 | 三核苷酸重复 | Genome Medicine | 10.675 | 哥伦比亚大学 | Interrogating the “unsequenceable” genomic trinucleotide repeat disorders by long-read sequencing |
2017 | 蝶蛹金小蜂 | Developmental and Comparative Immunology | 3.192 | 浙江大学昆虫科学研究所 | The genomic and transcriptomic analyses of serine proteases and their homologs in an endoparasitoid, Pteromalus puparum |
2017 | 酵母 | FEMS Yeast Research | 3.193 | 西南林业大学 | Enhancing expression of SSU1 genes in Saccharomyces uvarum leads to an increase in sulfite tolerance and a transcriptome profile change |
2017 | 冬虫夏草线粒体 | Gene | 2.984 | 湖南农业大学 | The mitochondrial genome of the lepidopteran host cadaver (Thitarodes sp.) of Ophiocordyceps sinensis and related phylogenetic analysis |
2017 | HIFI-Barcode | GigaScience | 5.993 | 中国农业大学植物保护学院 | Filling reference gaps via assembling DNA barcodes using high-throughput sequencing—moving toward barcoding the world |
2017 | 萤火虫 | GigaScience | 5.993 | 华中农业大学 | Long-read sequence assembly of the firefly Pyrocoelia pectoralis genome |
2017 | 烟草温和绿色花叶病毒 | Plant disease | 3.809 | 湖南农业大学 | Pumpkin: A New Natural Host of Tobacco mild green mosaic virus in China |
2017 | 肠杆菌属 | Genome Announcements | – | 湖南农业大学 | Complete Genome Sequence of Enterobacter sp. Strain ODB01, a Bacterium That Degrades Crude Oil |
2017 | 双歧杆菌 | mBio | 6.784 | 上海交大微生物代谢国重 | Genomic Microdiversity of Bifidobacterium pseudocatenulatum Underlying Differential Strain-Level Responses to Dietary Carbohydrate Intervention |
2016 | 人类 | Nature communications | 12.121 | 暨南大学 | Long-read sequencing and de novo assembly of a Chinese genome |
2016 | 棉花 | Plant Journal | 6.141 | 华中师范大学 | The cotton β‐galactosyltransferase 1 (GalT1) that galactosylates arabinogalactan proteins participates in controlling fiber development |
2016 | 油菜 | Frontiers in Plant Science | 4.402 | 华中科技大学 | Transcriptome Analysis of Stem and Globally Comparison with Other Tissues in Brassica napus |
2016 | 莲 | Scientific Reports | 3.998 | 武汉大学 | The mitochondrial genome map of Nelumbo nucifera reveals ancient evolutionary features |
2016 | 莲 | BMC Genomics | 3.594 | 武汉农科院蔬菜所 | Construction of a high-density, high-quality genetic map of cultivated lotus (Nelumbo nucifera) using next-generation sequencing |
2016 | NextSV | BMC Bioinformatics | 3.242 | 希望组 | NextSV: a meta-caller for structural variants from low-coverage long-read sequencing data |
2016 | 斑马鱼肠道微生物 | PLoS one | 2.74 | 华东师范大学 | Influence of endogenous and exogenous estrogenic endocrine on intestinal microbiota in zebrafish |
2016 | 冬虫夏草 | Journal of Microbiological Methods | 1.707 | 中科院北京微生物所 | Comparison of different sequencing and assembly strategies for a repeat-rich fungal genome, Ophiocordyceps sinensis |
2016 | 肉食杆菌 | Genome Announcements | – | 浙江万里大学 | Complete genome sequence of hemolysin-containing Carnobacterium sp. strain CP1 isolated from the Antarctic |
2016 | 稻纵卷叶螟颗粒病毒 | PLoS one | 2.74 | 江苏里下河农业科学研究所 | Genome of Cnaphalocrocis medinalis granulovirus, the first Crambidae-infecting betabaculovirus isolated from rice leaffolder to sequenced |
2016 | 链霉菌 | Journal of Biotechnology | 3.503 | 湖南农大 | Complete genome sequence of the Streptomyces sp. strain CdTB01, a bacterium tolerant to cadmium |
2016 | 莲 | Scientific Reports | 3.998 | 武汉大学 | The mitochondrial genome map of Nelumbo nucifera reveals ancient evolutionary features |
2016 | 蓝藻 | Standards in Genomic Sciences | 1.339 | 东南大学 | Complete genome sequence and genomic characterization of Microcystis panniformis FACHB 1757 by third-generation sequencing |
2016 | 杜仲 | Tree Genetics & Genomes | 2.081 | 中国林科院,郑州 | Complete chloroplast genome sequences of Eucommia ulmoides: genome structure and evolution |
2015 | 莲数据库 | Database | – | 中科院武汉植物园 | LOTUS-DB: an integrative and interactive database for Nelumbo nucifera study |
2015 | 苏云金芽孢杆菌 | PLoS one | 2.74 | 湖南师范大学 | Comparative analysis of genomics and proteomics in Bacillus thuringiensis 4.0718 |
2015 | 水稻 | PLoS one | 2.74 | 中科院武汉植物园 | Genome-wide dissection of the MicroRNA expression profile in rice embryo during early stages of seed germination |
2015 | 假单孢杆菌 | Genome Announcements | – | 浙江工业大学生物与环境工程学院 | Draft genome sequence of Pseudoalteromonas sp. strain R3, a red-pigmented L-amino acid oxidase-producing bacterium |
2015 | 肠道微生物 | Journal of Functional Foods | 3.701 | 湖南中科院亚热带农业研究所 | Disturbance of the intestinal microbial community by ursolic acid contributes to its function as a regulator of fat deposition |
2015 | 红球菌 | Genome Announcements | – | 上海海洋大学渔业和生命科学学院 | Complete Genome Sequence of Rhodococcus sp. B7740, a Carotenoid-Producing Bacterium Isolated from the Arctic Sea |
2015 | 冬虫夏草 | Scientific Reports | 3.998 | 中国农科院 | Complete mitochondrial genome of the medicinal fungus Ophiocordyceps sinensis |
2014 | 肠道沙门氏菌 | Scientific Reports | 3.998 | 武汉大学药学院 | DNA phosphorothioate modifications influence the global transcriptional response and protect DNA from double-stranded breaks |
2014 | 莲 | BMC Plant Biology | 3.497 | 武汉大学 | A precise chloroplast genome of Nelumbo nucifera (Nelumbonaceae) evaluated with Sanger, Illumina MiSeq, and PacBio RS II sequencing platforms: insight into the plastid evolution of basal eudicots |
2013 | 人类 | #N/A | 武汉儿童医院 | Exome sequencing identified NRG3 as a novel susceptible gene of Hirschsprung’s disease in a Chinese population | |
2013 | 博落回 | PLoS one | 2.74 | 湖南农大 | Integration of transcriptome, proteome and metabolism data reveals the alkaloids biosynthesis in Macleaya cordata and Macleaya microcarpa |
2012 | 灵芝 | PLoS one | 2.74 | 湖南农大 | The genome of Ganderma lucidum provide insights into triterpense biosynthesis and wood degradation |